SNP Report
Basic Infomation
| Name | rs10136206 dbSNP |
|---|---|
| Location | chr:14,68072010 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 14)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10483802 | 0.80[JPT][hapmap] |
| rs12434923 | 0.80[JPT][hapmap] |
| rs12435927 | 0.80[JPT][hapmap] |
| rs12436474 | 0.85[ASN][1000 genomes] |
| rs12587111 | 0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes] |
| rs12590620 | 0.82[AMR][1000 genomes];0.87[ASN][1000 genomes] |
| rs15493 | 0.80[JPT][hapmap] |
| rs17249444 | 0.93[JPT][hapmap];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
| rs3759768 | 0.86[JPT][hapmap] |
| rs56246064 | 0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes] |
| rs56981676 | 0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs58588003 | 0.85[AMR][1000 genomes];0.87[EUR][1000 genomes] |
| rs58668895 | 0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes] |
| rs8010798 | 0.80[JPT][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000259502 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014