SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 8)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs2143178	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2413583	0.81[EUR][1000 genomes]
rs4820372	0.80[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73165237	0.86[ASN][1000 genomes]
rs932329	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9607629	0.84[ASN][1000 genomes]
rs9611133	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9611134	0.94[AFR][1000 genomes];0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
PDGFB	Distal transcriptional regulation
RPL3	Distal transcriptional regulation
SNORD83B	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)