SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 7)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12404542	1.00[CHD][hapmap];0.83[GIH][hapmap];0.86[TSI][hapmap];1.00[ASN][1000 genomes]
rs12405259	1.00[ASN][1000 genomes]
rs12409449	1.00[ASN][1000 genomes]
rs17454947	1.00[CHD][hapmap];1.00[ASN][1000 genomes]
rs6413914	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6689533	0.92[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs942704	0.92[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.91[MKK][hapmap];0.94[TSI][hapmap];0.91[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CACNA1S	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 1)