SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 7)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10800776	0.94[CEU][hapmap];0.83[YRI][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1104858	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1104859	1.00[CEU][hapmap];0.87[YRI][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1419276	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1892026	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1892027	1.00[CEU][hapmap];0.87[YRI][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3729547	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
TNNT2	Proximal transcriptional regulation
TNNT2	Distal transcriptional regulation
TNNT2	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)