SNP Report
Basic Infomation
| Name | rs8031295 dbSNP |
|---|---|
| Location | chr:15,91043509 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 16)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs12437529 | 1.00[TSI][hapmap] |
| rs12439604 | 0.87[YRI][hapmap] |
| rs13380000 | 1.00[AMR][1000 genomes] |
| rs61343485 | 1.00[AMR][1000 genomes] |
| rs7161867 | 1.00[EUR][1000 genomes] |
| rs7162846 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs7169896 | 1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs7173346 | 1.00[AMR][1000 genomes] |
| rs8025187 | 1.00[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs8029551 | 1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs8035642 | 1.00[YRI][hapmap] |
| rs8035825 | 1.00[AMR][1000 genomes] |
| rs8035914 | 1.00[EUR][1000 genomes] |
| rs8036475 | 1.00[YRI][hapmap] |
| rs8038127 | 1.00[AMR][1000 genomes] |
| rs8042091 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| IQGAP1 | Proximal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014