SNP Report
Basic Infomation
| Name | rs8015115 dbSNP |
|---|---|
| Location | chr:14,68920378 |
| Allele | T/A |
LD-proxy of rSNPs(r2>0.8) (count: 14)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11846360 | 0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs11847185 | 0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs1468278 | 0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs17105675 | 0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs17755734 | 0.88[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs17755752 | 0.88[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs17828721 | 0.88[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs17828763 | 0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs1956535 | 0.85[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs2331705 | 0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs34256824 | 0.86[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs7149983 | 0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes] |
| rs73278328 | 0.82[AFR][1000 genomes] |
| rs8013944 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ZFP36L1 | Distal transcriptional regulation |
| RAD51B | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014