SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 28)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10101476	0.83[EUR][1000 genomes]
rs10106330	0.83[EUR][1000 genomes]
rs10505544	0.86[CHB][hapmap];0.86[JPT][hapmap]
rs11774511	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11774794	0.83[CHB][hapmap];0.85[JPT][hapmap]
rs11782225	0.87[EUR][1000 genomes]
rs11786408	0.86[EUR][1000 genomes]
rs12542618	0.87[CHB][hapmap];0.86[JPT][hapmap];0.81[ASN][1000 genomes]
rs12545943	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12675978	0.88[EUR][1000 genomes]
rs12679579	0.83[CHB][hapmap];0.86[JPT][hapmap];0.80[ASN][1000 genomes]
rs12679981	0.82[CHB][hapmap];0.86[JPT][hapmap]
rs1821339	0.80[ASN][1000 genomes]
rs1961510	0.87[EUR][1000 genomes]
rs4733710	0.81[CHB][hapmap];0.86[JPT][hapmap]
rs55977190	0.87[EUR][1000 genomes]
rs6470735	0.85[EUR][1000 genomes]
rs6470738	0.84[EUR][1000 genomes]
rs67184710	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs67751243	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6985031	0.84[EUR][1000 genomes]
rs6996139	0.84[EUR][1000 genomes]
rs7000021	0.87[EUR][1000 genomes]
rs72609883	0.80[ASN][1000 genomes]
rs7831581	0.84[EUR][1000 genomes]
rs7835768	0.87[EUR][1000 genomes]
rs7839288	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7839408	0.87[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CCDC26	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)