SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11167525	0.86[MEX][hapmap]
rs12656542	0.86[MEX][hapmap]
rs1382319	0.86[MEX][hapmap]
rs1478388	0.86[MEX][hapmap]
rs1531541	0.85[MEX][hapmap]
rs1545752	0.85[ASN][1000 genomes]
rs1904153	0.92[CEU][hapmap];1.00[JPT][hapmap]
rs2344178	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6868828	0.86[MEX][hapmap]
rs7727919	0.86[MEX][hapmap]
rs9324665	1.00[LWK][hapmap];1.00[YRI][hapmap]
rs964071	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.85[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ZNF300P1	Distal transcriptional regulation
ZNF300P1	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 1)