SNP Report

Basic Infomation

Name	rs7705093 dbSNP
Location	chr:5,96290647
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 42)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10038651	0.81[ASN][1000 genomes]
rs10044354	0.81[ASN][1000 genomes]
rs10051637	0.83[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs10058476	0.84[AMR][1000 genomes]
rs10061936	0.84[ASN][1000 genomes]
rs10069361	0.81[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs10077945	0.83[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs1046396	0.84[ASN][1000 genomes]
rs10476696	0.81[ASN][1000 genomes]
rs1216568	0.80[ASN][1000 genomes]
rs13170029	0.82[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs13358339	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs1363974	0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs1423357	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs1423566	0.84[ASN][1000 genomes]
rs1544777	0.81[AMR][1000 genomes]
rs193994	0.81[ASN][1000 genomes]
rs2161548	0.88[AFR][1000 genomes];0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs2351010	0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs2432141	0.84[ASN][1000 genomes]
rs2432142	0.82[ASN][1000 genomes]
rs2548224	0.82[ASN][1000 genomes]
rs2548516	0.84[ASN][1000 genomes]
rs2617435	0.81[ASN][1000 genomes]
rs2762	0.84[ASN][1000 genomes]
rs2910787	0.84[ASN][1000 genomes]
rs2910788	0.84[ASN][1000 genomes]
rs2910789	0.84[ASN][1000 genomes]
rs2910792	0.84[ASN][1000 genomes]
rs3797796	0.88[AFR][1000 genomes];0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs38033	0.81[ASN][1000 genomes]
rs38034	0.81[ASN][1000 genomes]
rs3909451	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs4360063	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs6870825	0.81[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs6871162	0.83[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs6887500	0.81[ASN][1000 genomes]
rs7703341	0.84[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs7716222	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs7726445	0.83[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs7731592	0.84[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs9314181	0.81[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
LNPEP	Proximal transcriptional regulation
LNPEP	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)