SNP Report
Basic Infomation
| Name | rs7454315 dbSNP |
|---|---|
| Location | chr:6,90769086 |
| Allele | C/T |
LD-proxy of rSNPs(r2>0.8) (count: 21)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs16882370 | 0.94[ASN][1000 genomes] |
| rs57216502 | 0.96[ASN][1000 genomes] |
| rs57315801 | 0.96[ASN][1000 genomes] |
| rs57765055 | 0.96[ASN][1000 genomes] |
| rs58059113 | 0.96[ASN][1000 genomes] |
| rs58745003 | 0.99[ASN][1000 genomes] |
| rs59963376 | 0.96[ASN][1000 genomes] |
| rs60124751 | 0.96[ASN][1000 genomes] |
| rs60148132 | 0.96[ASN][1000 genomes] |
| rs60279740 | 0.88[ASN][1000 genomes] |
| rs61120860 | 0.90[ASN][1000 genomes] |
| rs61246723 | 0.96[ASN][1000 genomes] |
| rs61478814 | 0.85[ASN][1000 genomes] |
| rs6919937 | 0.81[ASN][1000 genomes] |
| rs73497196 | 0.87[ASN][1000 genomes] |
| rs9353712 | 0.91[ASN][1000 genomes] |
| rs9444735 | 0.96[ASN][1000 genomes] |
| rs9444739 | 0.80[AMR][1000 genomes] |
| rs9451336 | 0.99[ASN][1000 genomes] |
| rs9451337 | 0.90[AMR][1000 genomes] |
| rs9451340 | 0.88[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| BACH2 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014