SNP Report
Basic Infomation
| Name | rs73484989 dbSNP |
|---|---|
| Location | chr:11,65065529 |
| Allele | G/T |
LD-proxy of rSNPs(r2>0.8) (count: 16)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs17146805 | 0.90[AFR][1000 genomes] |
| rs4149823 | 0.90[AFR][1000 genomes] |
| rs4149824 | 0.90[AFR][1000 genomes] |
| rs4149839 | 0.90[AFR][1000 genomes] |
| rs57267799 | 0.90[AFR][1000 genomes] |
| rs59598510 | 0.90[AFR][1000 genomes] |
| rs59646878 | 0.90[AFR][1000 genomes] |
| rs60315122 | 0.90[AFR][1000 genomes] |
| rs73482957 | 0.81[AFR][1000 genomes] |
| rs73482959 | 0.81[AFR][1000 genomes] |
| rs73482972 | 0.90[AFR][1000 genomes] |
| rs73484950 | 0.90[AFR][1000 genomes] |
| rs73484954 | 0.90[AFR][1000 genomes] |
| rs73484963 | 0.90[AFR][1000 genomes] |
| rs73484966 | 0.90[AFR][1000 genomes] |
| rs73484981 | 0.90[AFR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| POLA2 | Proximal transcriptional regulation |
| POLA2 | Distal transcriptional regulation |
| CDC42EP2 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014