SNP Report
Basic Infomation
| Name | rs73305070 dbSNP |
|---|---|
| Location | chr:12,50029584 |
| Allele | C/T |
LD-proxy of rSNPs(r2>0.8) (count: 18)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs57046047 | 1.00[AMR][1000 genomes] |
| rs57625108 | 1.00[AMR][1000 genomes] |
| rs58039341 | 1.00[AMR][1000 genomes] |
| rs61438877 | 1.00[AMR][1000 genomes] |
| rs73305065 | 1.00[AMR][1000 genomes] |
| rs73305068 | 1.00[AMR][1000 genomes] |
| rs73305081 | 1.00[AMR][1000 genomes] |
| rs73305101 | 1.00[AMR][1000 genomes] |
| rs73306844 | 1.00[AMR][1000 genomes] |
| rs73306846 | 1.00[AMR][1000 genomes] |
| rs73306865 | 1.00[AMR][1000 genomes] |
| rs73306875 | 1.00[AMR][1000 genomes] |
| rs73306891 | 1.00[AMR][1000 genomes] |
| rs73309004 | 1.00[AMR][1000 genomes] |
| rs73309010 | 1.00[AMR][1000 genomes] |
| rs73309013 | 1.00[AMR][1000 genomes] |
| rs73309017 | 1.00[AMR][1000 genomes] |
| rs73309026 | 1.00[AMR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| PRPF40B | Proximal transcriptional regulation |
| TMBIM6 | Distal transcriptional regulation |
| PRPF40B | Distal transcriptional regulation |
| HIGD1AP9 | Distal transcriptional regulation |
| SRD5A3-AS1 | Distal transcriptional regulation |
| TMEM165 | Distal transcriptional regulation |
| PRPF40B | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014