SNP Report
Basic Infomation
| Name | rs73102537 dbSNP |
|---|---|
| Location | chr:12,40165368 |
| Allele | G/T |
LD-proxy of rSNPs(r2>0.8) (count: 31)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs58831669 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs61586519 | 0.82[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7305817 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73087812 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73087828 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73087852 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73087857 | 1.00[AMR][1000 genomes] |
| rs73087858 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73092112 | 0.96[AFR][1000 genomes] |
| rs73092158 | 0.92[AFR][1000 genomes] |
| rs73095648 | 1.00[AMR][1000 genomes] |
| rs73095657 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73095662 | 0.92[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73095664 | 0.92[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73096551 | 0.85[AFR][1000 genomes] |
| rs73096571 | 0.85[AFR][1000 genomes] |
| rs73096578 | 0.85[AFR][1000 genomes] |
| rs73098557 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73098572 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73098577 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73098599 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73102528 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73102556 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73102559 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73102562 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs73102575 | 0.96[AFR][1000 genomes] |
| rs73104971 | 0.85[AFR][1000 genomes] |
| rs73104975 | 0.85[AFR][1000 genomes] |
| rs73104981 | 0.85[AFR][1000 genomes] |
| rs7311368 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7962740 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000199571 | Distal transcriptional regulation |
| C12orf40 | RNA binding protein mediated regulation |
| SLC2A13 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014