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rVarBase
SNP Report
Basic Infomation
Name
rs72894079  
dbSNP
Location
chr:1,1203745
Allele
A/G
LD-proxy of rSNPs(r
2
>0.8) (count: 4)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs57513698
1.00[AMR][1000 genomes]
rs59074371
1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72896205
1.00[AMR][1000 genomes]
rs72896212
1.00[AMR][1000 genomes]
rSNP related genes
Symbol
Regulation type
UBE2J2
Proximal transcriptional regulation
SSU72
Distal transcriptional regulation
ENSG00000215014
Distal transcriptional regulation
ACAP3
Distal transcriptional regulation
SCNN1D
Distal transcriptional regulation
UBE2J2
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)