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rVarBase
SNP Report
Basic Infomation
Name
rs72830649  
dbSNP
Location
chr:6,20609477
Allele
T/C
LD-proxy of rSNPs(r
2
>0.8) (count: 15)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10456232
0.82[AFR][1000 genomes]
rs10456233
0.82[AFR][1000 genomes]
rs12153939
0.82[AFR][1000 genomes]
rs12204865
0.82[AFR][1000 genomes]
rs2069013
0.82[AFR][1000 genomes]
rs2069014
0.82[AFR][1000 genomes]
rs62400062
0.82[AFR][1000 genomes]
rs62400063
0.82[AFR][1000 genomes]
rs62400066
0.82[AFR][1000 genomes]
rs6911357
1.00[ASN][1000 genomes]
rs6938978
1.00[ASN][1000 genomes]
rs72830623
0.82[AFR][1000 genomes]
rs72830625
0.82[AFR][1000 genomes]
rs72830628
0.82[AFR][1000 genomes]
rs72830632
0.82[AFR][1000 genomes]
rSNP related genes
Symbol
Regulation type
CDKAL1
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)