SNP Report
Basic Infomation
| Name | rs72822426 dbSNP |
|---|---|
| Location | chr:10,81679789 |
| Allele | A/G |
LD-proxy of rSNPs(r2>0.8) (count: 14)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs1010775 | 1.00[EUR][1000 genomes] |
| rs11817253 | 0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs1570329 | 1.00[EUR][1000 genomes] |
| rs17880097 | 1.00[EUR][1000 genomes] |
| rs17880779 | 1.00[EUR][1000 genomes] |
| rs17885228 | 0.88[EUR][1000 genomes] |
| rs2015324 | 0.89[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs41288010 | 1.00[EUR][1000 genomes] |
| rs41290626 | 1.00[EUR][1000 genomes] |
| rs45466198 | 0.89[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs45555035 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs45614540 | 0.83[AFR][1000 genomes] |
| rs72822440 | 0.89[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs878795 | 0.85[AFR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| MBL1P | Proximal transcriptional regulation |
| MBL1P | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014