SNP Report

Basic Infomation

Name	rs71407319 dbSNP
Location	chr:15,91183861
Allele	C/A

LD-proxy of rSNPs(r²>0.8) (count: 70)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10048037	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10438437	0.80[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs10852137	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10852138	0.93[EUR][1000 genomes]
rs11073941	0.93[EUR][1000 genomes]
rs11073942	0.93[EUR][1000 genomes]
rs11852380	0.92[ASN][1000 genomes]
rs11856388	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12903655	0.82[ASN][1000 genomes]
rs12904055	0.82[ASN][1000 genomes]
rs12908226	0.86[ASN][1000 genomes]
rs12908296	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12908364	0.86[ASN][1000 genomes]
rs12908911	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12909246	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12909338	0.91[EUR][1000 genomes]
rs12909526	0.87[AFR][1000 genomes]
rs12915979	0.87[ASN][1000 genomes]
rs12916672	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs16944683	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2286287	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs28521639	0.93[EUR][1000 genomes]
rs28621895	0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs34358242	0.80[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs34759713	0.82[ASN][1000 genomes]
rs34935401	0.92[ASN][1000 genomes]
rs35392347	0.92[ASN][1000 genomes]
rs35583150	0.92[ASN][1000 genomes]
rs35696015	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35907368	0.92[ASN][1000 genomes]
rs35977271	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3743403	0.89[EUR][1000 genomes]
rs3743405	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4244880	0.82[ASN][1000 genomes]
rs4244882	0.83[ASN][1000 genomes]
rs4404048	0.92[ASN][1000 genomes]
rs4454949	0.81[ASN][1000 genomes]
rs4609824	0.83[ASN][1000 genomes]
rs4609825	0.83[ASN][1000 genomes]
rs4932175	0.83[ASN][1000 genomes]
rs4932356	0.80[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs4932358	0.93[EUR][1000 genomes]
rs4932359	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4932360	0.90[EUR][1000 genomes]
rs4932361	0.93[EUR][1000 genomes]
rs5011653	0.96[EUR][1000 genomes]
rs56961537	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs57373970	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs60433006	0.92[ASN][1000 genomes]
rs62025076	0.85[ASN][1000 genomes]
rs62025077	0.84[ASN][1000 genomes]
rs6496711	0.91[EUR][1000 genomes]
rs6496714	0.93[EUR][1000 genomes]
rs71407316	0.89[EUR][1000 genomes]
rs71407317	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs71407318	0.88[EUR][1000 genomes]
rs71407321	0.92[ASN][1000 genomes]
rs7163000	0.93[EUR][1000 genomes]
rs7165170	0.93[EUR][1000 genomes]
rs7166787	0.93[EUR][1000 genomes]
rs7171177	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7171533	0.95[ASN][1000 genomes]
rs7173624	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7174232	0.83[ASN][1000 genomes]
rs7175560	0.80[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs7176303	0.83[ASN][1000 genomes]
rs7178774	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs8031293	0.89[EUR][1000 genomes]
rs8041597	0.89[EUR][1000 genomes]
rs9972482	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000259736	RNA binding protein mediated regulation
CRTC3	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)