SNP Report
Basic Infomation
| Name | rs7135349 dbSNP |
|---|---|
| Location | chr:12,40284554 |
| Allele | C/T |
LD-proxy of rSNPs(r2>0.8) (count: 16)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10877748 | 1.00[CEU][hapmap] |
| rs11564163 | 1.00[CEU][hapmap] |
| rs17127219 | 1.00[CEU][hapmap];1.00[AMR][1000 genomes] |
| rs17127234 | 1.00[CEU][hapmap] |
| rs17127239 | 1.00[CEU][hapmap] |
| rs28370698 | 1.00[CEU][hapmap] |
| rs66484722 | 1.00[AMR][1000 genomes] |
| rs7305465 | 1.00[CEU][hapmap] |
| rs7305817 | 1.00[CEU][hapmap] |
| rs73092219 | 1.00[AMR][1000 genomes] |
| rs73092225 | 1.00[AMR][1000 genomes] |
| rs73092257 | 1.00[AMR][1000 genomes] |
| rs73105001 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7311368 | 1.00[CEU][hapmap] |
| rs7315985 | 1.00[CEU][hapmap] |
| rs7962740 | 1.00[CEU][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| C12orf40 | RNA binding protein mediated regulation |
| SLC2A13 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014