SNP Report
Basic Infomation
| Name | rs7085863 dbSNP |
|---|---|
| Location | chr:10,82118422 |
| Allele | T/C |
LD-proxy of rSNPs(r2>0.8) (count: 49)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10887721 | 1.00[ASN][1000 genomes] |
| rs12240624 | 1.00[ASN][1000 genomes] |
| rs17105302 | 1.00[GIH][hapmap];1.00[ASN][1000 genomes] |
| rs1934144 | 0.85[CEU][hapmap];1.00[ASN][1000 genomes] |
| rs2248239 | 1.00[ASN][1000 genomes] |
| rs2573349 | 1.00[ASN][1000 genomes] |
| rs2573350 | 0.85[CEU][hapmap];1.00[ASN][1000 genomes] |
| rs2573354 | 1.00[ASN][1000 genomes] |
| rs2573355 | 1.00[ASN][1000 genomes] |
| rs2573376 | 0.85[CEU][hapmap];1.00[ASN][1000 genomes] |
| rs2784771 | 1.00[ASN][1000 genomes] |
| rs2784772 | 1.00[ASN][1000 genomes] |
| rs2784774 | 0.85[CEU][hapmap];1.00[ASN][1000 genomes] |
| rs2788297 | 1.00[ASN][1000 genomes] |
| rs2789641 | 0.85[CEU][hapmap];1.00[ASN][1000 genomes] |
| rs2789687 | 1.00[ASN][1000 genomes] |
| rs2789689 | 1.00[ASN][1000 genomes] |
| rs2789691 | 1.00[ASN][1000 genomes] |
| rs2789692 | 1.00[ASN][1000 genomes] |
| rs2789693 | 1.00[ASN][1000 genomes] |
| rs2789694 | 1.00[ASN][1000 genomes] |
| rs2819944 | 0.85[CEU][hapmap];1.00[ASN][1000 genomes] |
| rs2819948 | 1.00[ASN][1000 genomes] |
| rs2819949 | 0.85[CEU][hapmap];1.00[ASN][1000 genomes] |
| rs2819951 | 0.85[CEU][hapmap];1.00[ASN][1000 genomes] |
| rs2819953 | 1.00[ASN][1000 genomes] |
| rs2880601 | 1.00[ASN][1000 genomes] |
| rs3862534 | 0.85[CEU][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];1.00[ASN][1000 genomes] |
| rs41284066 | 1.00[ASN][1000 genomes] |
| rs58411552 | 1.00[ASN][1000 genomes] |
| rs60366349 | 1.00[ASN][1000 genomes] |
| rs61188968 | 1.00[ASN][1000 genomes] |
| rs61734475 | 1.00[ASN][1000 genomes] |
| rs72824337 | 1.00[ASN][1000 genomes] |
| rs72824338 | 1.00[ASN][1000 genomes] |
| rs73305111 | 1.00[ASN][1000 genomes] |
| rs73305115 | 1.00[ASN][1000 genomes] |
| rs73305118 | 1.00[ASN][1000 genomes] |
| rs73305120 | 1.00[ASN][1000 genomes] |
| rs73305127 | 1.00[ASN][1000 genomes] |
| rs73305130 | 1.00[ASN][1000 genomes] |
| rs73305132 | 1.00[ASN][1000 genomes] |
| rs73305140 | 1.00[ASN][1000 genomes] |
| rs73305142 | 1.00[ASN][1000 genomes] |
| rs73305144 | 1.00[ASN][1000 genomes] |
| rs74143168 | 1.00[ASN][1000 genomes] |
| rs7906548 | 1.00[ASN][1000 genomes] |
| rs9421467 | 0.85[CEU][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes];1.00[ASN][1000 genomes] |
| rs946889 | 0.89[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| DYDC1 | Proximal transcriptional regulation |
| DYDC2 | Distal transcriptional regulation |
| DYDC2 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 10)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014