SNP Report
Name | rs6740462   dbSNP |
---|---|
Location | chr:2,65667272 |
Allele | C/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs11685231 | 1.00[CHB][hapmap];0.92[CHD][hapmap];0.90[JPT][hapmap];0.96[ASN][1000 genomes] |
rs11689701 | 1.00[CHB][hapmap];0.90[JPT][hapmap];0.96[ASN][1000 genomes] |
rs12185613 | 0.99[ASN][1000 genomes] |
rs12613858 | 0.96[ASN][1000 genomes] |
rs1437459 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes] |
rs1437460 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes] |
rs1437465 | 1.00[CHB][hapmap];0.90[JPT][hapmap];0.99[ASN][1000 genomes] |
rs2099579 | 0.95[ASN][1000 genomes] |
rs2118304 | 0.93[CHB][hapmap];0.96[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes] |
rs268123 | 1.00[CHB][hapmap];0.92[CHD][hapmap];0.90[JPT][hapmap];0.99[ASN][1000 genomes] |
rs268124 | 0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs2901767 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes] |
rs4671129 | 1.00[ASN][1000 genomes] |
rs4671664 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes] |
rs4671665 | 0.98[ASN][1000 genomes] |
rs66931669 | 0.94[ASN][1000 genomes] |
rs6711681 | 1.00[ASN][1000 genomes] |
rs67403458 | 0.96[ASN][1000 genomes] |
rs72805798 | 0.95[ASN][1000 genomes] |
rs72808008 | 0.96[ASN][1000 genomes] |
rs72898508 | 0.95[ASN][1000 genomes] |
rs7561538 | 0.95[ASN][1000 genomes] |
rs7566618 | 1.00[CHB][hapmap];0.92[CHD][hapmap];0.82[GIH][hapmap];0.90[JPT][hapmap];0.96[ASN][1000 genomes] |
rs934730 | 0.93[ASN][1000 genomes] |
rs934736 | 0.93[CHB][hapmap];0.90[JPT][hapmap];0.99[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
ACTR2 | Distal transcriptional regulation |
SPRED2 | Distal transcriptional regulation |
ENSG00000204929 | Distal transcriptional regulation |
ENSG00000204929 | RNA binding protein mediated regulation |
Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL related gene | Source |
---|---|
CNRIP1 | SCAN |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014