SNP Report

Basic Infomation

Name	rs6669216 dbSNP
Location	chr:1,155454881
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 55)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10158037	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10158433	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10465954	0.83[AFR][1000 genomes]
rs13375379	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16836851	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16836867	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28438500	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28452675	0.83[AFR][1000 genomes]
rs28491466	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28507559	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56035547	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56770523	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57334798	0.91[AFR][1000 genomes]
rs57519519	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57807227	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58621120	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58647953	0.83[AFR][1000 genomes]
rs58850753	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59633238	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59815288	1.00[AMR][1000 genomes]
rs59913551	0.89[AFR][1000 genomes]
rs59992966	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60568057	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60818259	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61403978	0.96[AFR][1000 genomes]
rs61583506	1.00[AMR][1000 genomes]
rs61631408	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6427277	0.90[AFR][1000 genomes]
rs6658401	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6659913	0.87[AFR][1000 genomes]
rs6665660	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6665939	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6681252	0.86[AFR][1000 genomes]
rs6692952	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72993428	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72993486	0.90[AFR][1000 genomes]
rs72995115	0.93[AFR][1000 genomes]
rs72995140	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72995165	0.89[AFR][1000 genomes]
rs72995166	0.88[AFR][1000 genomes]
rs72995171	0.92[AFR][1000 genomes]
rs72995173	0.88[AFR][1000 genomes]
rs72995177	0.95[AFR][1000 genomes]
rs73008931	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73008968	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73008999	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73010906	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73010909	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73010921	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7517139	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7517777	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7532714	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7541017	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9988453	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9988540	0.88[AFR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ASH1L	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)