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rVarBase
SNP Report
Basic Infomation
Name
rs61990085  
dbSNP
Location
chr:14,68067727
Allele
G/T/A
LD-proxy of rSNPs(r
2
>0.8) (count: 6)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs2236230
0.88[ASN][1000 genomes]
rs35108968
1.00[ASN][1000 genomes]
rs3809389
0.88[ASN][1000 genomes]
rs45571637
0.97[ASN][1000 genomes]
rs56785855
0.84[ASN][1000 genomes]
rs749269
0.94[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
PIGH
Proximal transcriptional regulation
RDH11
Distal transcriptional regulation
ARG2
Distal transcriptional regulation
VTI1B
Distal transcriptional regulation
ENSG00000201529
Distal transcriptional regulation
PLEKHH1
Distal transcriptional regulation
ENSG00000266117
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)