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rVarBase
SNP Report
Basic Infomation
Name
rs6089776  
dbSNP
Location
chr:20,62414548
Allele
T/C
LD-proxy of rSNPs(r
2
>0.8) (count: 4)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs2148803
0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4809344
0.82[EUR][1000 genomes]
rs6010650
0.82[EUR][1000 genomes]
rs6011109
0.82[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
ZBTB46
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)