SNP Report

Basic Infomation

Name	rs6087942 dbSNP
Location	chr:20,31177592
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 32)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs17123396	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2002361	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs293562	1.00[EUR][1000 genomes]
rs293564	1.00[EUR][1000 genomes]
rs293565	0.98[EUR][1000 genomes]
rs293568	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs293569	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs293571	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs293572	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs293573	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs296470	1.00[EUR][1000 genomes]
rs57351160	0.84[EUR][1000 genomes]
rs59086887	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6058742	0.98[EUR][1000 genomes]
rs60764690	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6087395	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6087924	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6087933	0.80[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6087935	0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61053604	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6119266	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6119899	0.80[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6119900	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6119907	0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6119908	0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6141318	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6141747	0.98[EUR][1000 genomes]
rs6141748	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6141751	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs73248101	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs880112	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs881432	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
C20orf112	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)