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rVarBase
SNP Report
Basic Infomation
Name
rs6087860  
dbSNP
Location
chr:20,30869711
Allele
G/T
LD-proxy of rSNPs(r
2
>0.8) (count: 4)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs1737891
1.00[CEU][hapmap]
rs6087370
1.00[CEU][hapmap];1.00[CHB][hapmap];0.85[JPT][hapmap];0.94[EUR][1000 genomes]
rs6087820
1.00[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap]
rs6087861
1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
ENSG00000264308
Proximal transcriptional regulation
KIF3B
Distal transcriptional regulation
ENSG00000264308
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)