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rVarBase
SNP Report
Basic Infomation
Name
rs60650386  
dbSNP
Location
chr:1,155274484
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 9)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10157264
1.00[AMR][1000 genomes]
rs16836822
1.00[AMR][1000 genomes]
rs35826120
1.00[AMR][1000 genomes]
rs60211142
1.00[AMR][1000 genomes]
rs60455144
0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61518562
1.00[AMR][1000 genomes]
rs7549232
1.00[AMR][1000 genomes]
rs8177963
1.00[AMR][1000 genomes]
rs9803672
1.00[AMR][1000 genomes]
rSNP related genes
Symbol
Regulation type
PKLR
Proximal transcriptional regulation
FDPS
Proximal transcriptional regulation
GBAP1
Distal transcriptional regulation
CLK2
Distal transcriptional regulation
HCN3
Distal transcriptional regulation
PKLR
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)