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rVarBase
SNP Report
Basic Infomation
Name
rs6058615  
dbSNP
Location
chr:20,30865655
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 7)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs6058616
0.84[AFR][1000 genomes]
rs62206868
1.00[ASN][1000 genomes]
rs62206875
1.00[ASN][1000 genomes]
rs62206933
0.89[ASN][1000 genomes]
rs62208760
0.92[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs62208763
0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs62208770
0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
ENSG00000264308
Proximal transcriptional regulation
PLAGL2
Distal transcriptional regulation
POFUT1
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)