SNP Report
Basic Infomation
| Name | rs6011132 dbSNP |
|---|---|
| Location | chr:20,62439541 |
| Allele | C/G |
LD-proxy of rSNPs(r2>0.8) (count: 54)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11086127 | 0.82[ASN][1000 genomes] |
| rs11697261 | 0.82[ASN][1000 genomes] |
| rs11698072 | 0.83[ASN][1000 genomes] |
| rs11905140 | 0.82[ASN][1000 genomes] |
| rs11906437 | 0.82[ASN][1000 genomes] |
| rs11906513 | 0.82[ASN][1000 genomes] |
| rs11906517 | 0.82[ASN][1000 genomes] |
| rs11908487 | 0.82[ASN][1000 genomes] |
| rs11908565 | 0.85[AFR][1000 genomes];0.82[ASN][1000 genomes] |
| rs4538263 | 0.82[ASN][1000 genomes] |
| rs4809229 | 0.80[ASN][1000 genomes] |
| rs4809345 | 0.88[AFR][1000 genomes];0.82[ASN][1000 genomes] |
| rs4809348 | 0.83[ASN][1000 genomes] |
| rs4809349 | 0.81[ASN][1000 genomes] |
| rs4809350 | 0.81[ASN][1000 genomes] |
| rs4809351 | 0.81[ASN][1000 genomes] |
| rs4809352 | 0.84[ASN][1000 genomes] |
| rs4809353 | 0.81[ASN][1000 genomes] |
| rs4809363 | 0.81[AFR][1000 genomes] |
| rs57498343 | 0.87[ASN][1000 genomes] |
| rs57620666 | 0.82[ASN][1000 genomes] |
| rs58150746 | 0.92[ASN][1000 genomes] |
| rs6010653 | 0.80[ASN][1000 genomes] |
| rs6010655 | 0.82[ASN][1000 genomes] |
| rs6010656 | 0.82[ASN][1000 genomes] |
| rs6010658 | 0.82[ASN][1000 genomes] |
| rs6010659 | 0.82[ASN][1000 genomes] |
| rs6010660 | 0.82[ASN][1000 genomes] |
| rs6010661 | 0.87[AFR][1000 genomes];0.87[ASN][1000 genomes] |
| rs6011119 | 0.80[ASN][1000 genomes] |
| rs6011121 | 0.82[ASN][1000 genomes] |
| rs6011124 | 0.88[AFR][1000 genomes];0.82[ASN][1000 genomes] |
| rs6011125 | 0.82[ASN][1000 genomes] |
| rs6011126 | 0.82[ASN][1000 genomes] |
| rs6011127 | 0.85[AFR][1000 genomes];0.82[ASN][1000 genomes] |
| rs6011128 | 0.94[ASN][1000 genomes] |
| rs6011129 | 0.84[ASN][1000 genomes] |
| rs6011130 | 0.90[ASN][1000 genomes] |
| rs6011131 | 0.84[ASN][1000 genomes] |
| rs6011145 | 0.84[AFR][1000 genomes];0.81[ASN][1000 genomes] |
| rs6011152 | 0.81[AFR][1000 genomes] |
| rs6011158 | 0.81[AFR][1000 genomes] |
| rs66486049 | 0.87[ASN][1000 genomes] |
| rs66780440 | 0.82[ASN][1000 genomes] |
| rs66859979 | 0.81[ASN][1000 genomes] |
| rs67078803 | 0.92[ASN][1000 genomes] |
| rs67415541 | 0.87[ASN][1000 genomes] |
| rs67549383 | 0.82[ASN][1000 genomes] |
| rs67796606 | 0.80[ASN][1000 genomes] |
| rs67835080 | 0.92[ASN][1000 genomes] |
| rs73624722 | 0.88[ASN][1000 genomes] |
| rs73624724 | 0.90[ASN][1000 genomes] |
| rs73624726 | 0.90[ASN][1000 genomes] |
| rs73624728 | 0.87[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ZBTB46 | RNA binding protein mediated regulation |
| ENSG00000231208 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014