SNP Report
Basic Infomation
| Name | rs60011422 dbSNP |
|---|---|
| Location | chr:10,82038648 |
| Allele | T/C |
LD-proxy of rSNPs(r2>0.8) (count: 16)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs35695306 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs56088018 | 1.00[EUR][1000 genomes] |
| rs57070273 | 1.00[AMR][1000 genomes] |
| rs57929966 | 1.00[EUR][1000 genomes] |
| rs58141836 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs7077758 | 1.00[EUR][1000 genomes] |
| rs7097297 | 1.00[EUR][1000 genomes] |
| rs73299566 | 1.00[EUR][1000 genomes] |
| rs73299570 | 1.00[EUR][1000 genomes] |
| rs73301414 | 1.00[EUR][1000 genomes] |
| rs73301418 | 1.00[EUR][1000 genomes] |
| rs73301483 | 1.00[EUR][1000 genomes] |
| rs73303199 | 1.00[EUR][1000 genomes] |
| rs73305104 | 1.00[EUR][1000 genomes] |
| rs73305107 | 1.00[EUR][1000 genomes] |
| rs73305108 | 1.00[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| MAT1A | Proximal transcriptional regulation |
| MAT1A | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014