Home
Search
List search
Advanced Search
Data content
Tutorial
About Us
Feedback
rVarBase
SNP Report
Basic Infomation
Name
rs58087807  
dbSNP
Location
chr:20,44089033
Allele
T/C
LD-proxy of rSNPs(r
2
>0.8) (count: 12)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs2272951
0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2272952
0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2272954
0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55818401
0.81[AFR][1000 genomes]
rs56339761
0.87[AFR][1000 genomes]
rs59412456
0.81[AFR][1000 genomes]
rs59491437
0.81[AFR][1000 genomes]
rs6130840
0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7267749
1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73907979
0.91[AFR][1000 genomes]
rs73907981
1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73907982
0.87[AFR][1000 genomes]
rSNP related genes
Symbol
Regulation type
NCOA5
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)