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rVarBase
SNP Report
Basic Infomation
Name
rs57438184  
dbSNP
Location
chr:12,40549763
Allele
T/A
LD-proxy of rSNPs(r
2
>0.8) (count: 7)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs17489170
0.83[AFR][1000 genomes]
rs17489466
0.83[AFR][1000 genomes]
rs17518190
0.83[AFR][1000 genomes]
rs56193998
0.83[AFR][1000 genomes]
rs60755503
0.83[AFR][1000 genomes]
rs74089003
0.83[AFR][1000 genomes]
rs74091033
0.83[AFR][1000 genomes]
rSNP related genes
Symbol
Regulation type
ENSG00000223914
Proximal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)