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rVarBase
SNP Report
Basic Infomation
Name
rs57251277  
dbSNP
Location
chr:12,49405480
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 2)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs17123516
0.85[AFR][1000 genomes]
rs7313188
0.85[AFR][1000 genomes]
rSNP related genes
Symbol
Regulation type
TUBA1B
Distal transcriptional regulation
ENSG00000258017
Distal transcriptional regulation
WNT1
Distal transcriptional regulation
ARF3
Distal transcriptional regulation
ENSG00000257913
RNA binding protein mediated regulation
PRKAG1
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)