SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 7)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs17146407	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs3888184	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3888185	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56326606	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61458234	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7105257	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7123368	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ARL2	Distal transcriptional regulation
SNX15	Distal transcriptional regulation
SF1	Distal transcriptional regulation
ENSG00000269038	Distal transcriptional regulation
ENSG00000269290	Distal transcriptional regulation
RASGRP2	Distal transcriptional regulation
PYGM	Distal transcriptional regulation
EHD1	Distal transcriptional regulation
ENSG00000228732	Distal transcriptional regulation
NRXN2	Distal transcriptional regulation
CDC42BPG	Distal transcriptional regulation
EHD1	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)