SNP Report

Basic Infomation

Name	rs56324610 dbSNP
Location	chr:20,44564030
Allele	G/C

LD-proxy of rSNPs(r²>0.8) (count: 5)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs17448680	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3746513	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3893276	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6073967	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8123864	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
RNU7-1	Distal transcriptional regulation
C12orf57	Distal transcriptional regulation
SLC7A6OS	Distal transcriptional regulation
PRMT7	Distal transcriptional regulation
EIF2C3	Distal transcriptional regulation
ZC3H12A	Distal transcriptional regulation
ST3GAL3	Distal transcriptional regulation
ENSG00000231485	Distal transcriptional regulation
KIAA0907	Distal transcriptional regulation
ZBTB4	Distal transcriptional regulation
POLR2A	Distal transcriptional regulation
ENSG00000263931	Distal transcriptional regulation
KLF11	Distal transcriptional regulation
PTGER4	Distal transcriptional regulation
FBXW2	Distal transcriptional regulation
ENSG00000214654	Distal transcriptional regulation
PTGR1	Distal transcriptional regulation
DNTTIP1	Distal transcriptional regulation
UBE2C	Distal transcriptional regulation
TNNC2	Distal transcriptional regulation
SPATA25	Distal transcriptional regulation
NEURL2	Distal transcriptional regulation
CTSA	Distal transcriptional regulation
PLTP	Distal transcriptional regulation
ZNF335	Distal transcriptional regulation
FTLP1	Distal transcriptional regulation
SNX21	Distal transcriptional regulation
ZSWIM3	Distal transcriptional regulation
ZSWIM1	Distal transcriptional regulation
ACOT8	Distal transcriptional regulation
KRT18	Distal transcriptional regulation
KRT8	Distal transcriptional regulation
EPPIN	Distal transcriptional regulation
EPPIN-WFDC6	Distal transcriptional regulation
WFDC3	Distal transcriptional regulation
NCOA5	Distal transcriptional regulation
SLC12A5	Distal transcriptional regulation
ENSG00000204044	Distal transcriptional regulation
ENSG00000240742	Distal transcriptional regulation
DDX6	Distal transcriptional regulation
ENSG00000221046	Distal transcriptional regulation
SLC35C2	Distal transcriptional regulation
KDM4C	Distal transcriptional regulation
PCIF1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)