SNP Report

Basic Infomation

Name	rs56104319 dbSNP
Location	chr:9,139372458
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 41)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10125481	1.00[AMR][1000 genomes]
rs11574911	1.00[AMR][1000 genomes]
rs3812559	1.00[AMR][1000 genomes]
rs55756446	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55876823	1.00[AMR][1000 genomes]
rs56249719	1.00[AMR][1000 genomes]
rs56763763	1.00[AMR][1000 genomes]
rs57177291	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57555162	1.00[AMR][1000 genomes]
rs57827820	1.00[AMR][1000 genomes]
rs58268999	1.00[AMR][1000 genomes]
rs59857197	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60530815	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61274518	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61384172	1.00[AMR][1000 genomes]
rs73565200	1.00[AMR][1000 genomes]
rs73568519	1.00[AMR][1000 genomes]
rs73668304	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73668307	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73668310	1.00[AMR][1000 genomes]
rs73670237	1.00[AMR][1000 genomes]
rs73670238	1.00[AMR][1000 genomes]
rs73670242	1.00[AMR][1000 genomes]
rs73670243	1.00[AMR][1000 genomes]
rs73670252	1.00[AMR][1000 genomes]
rs73670254	1.00[AMR][1000 genomes]
rs73670255	1.00[AMR][1000 genomes]
rs73670261	1.00[AMR][1000 genomes]
rs73670263	1.00[AMR][1000 genomes]
rs73670268	1.00[AMR][1000 genomes]
rs73670269	1.00[AMR][1000 genomes]
rs73670270	1.00[AMR][1000 genomes]
rs73670272	1.00[AMR][1000 genomes]
rs73670274	1.00[AMR][1000 genomes]
rs73670275	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73670278	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73670280	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73670281	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73670284	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73670286	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73670287	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
SEC16A	Proximal transcriptional regulation
SNAPC4	Distal transcriptional regulation
EGFL7	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)