SNP Report
Basic Infomation
| Name | rs55982127 dbSNP |
|---|---|
| Location | chr:14,69024261 |
| Allele | C/T |
LD-proxy of rSNPs(r2>0.8) (count: 14)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs12100794 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs17105852 | 0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs17829021 | 1.00[EUR][1000 genomes] |
| rs2525506 | 1.00[ASN][1000 genomes] |
| rs4902602 | 1.00[ASN][1000 genomes] |
| rs55670604 | 1.00[ASN][1000 genomes] |
| rs56026252 | 0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs56054401 | 1.00[ASN][1000 genomes] |
| rs56147515 | 0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs56239917 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs61985775 | 1.00[ASN][1000 genomes] |
| rs61985777 | 1.00[ASN][1000 genomes] |
| rs8012659 | 1.00[ASN][1000 genomes] |
| rs8017001 | 1.00[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ZFP36L1 | Distal transcriptional regulation |
| RAD51B | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014