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rVarBase
SNP Report
Basic Infomation
Name
rs55633940  
dbSNP
Location
chr:5,131398594
Allele
G/C
LD-proxy of rSNPs(r
2
>0.8) (count: 5)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs57671544
0.85[AMR][1000 genomes]
rs73259947
0.85[AMR][1000 genomes]
rs73259953
1.00[AMR][1000 genomes]
rs73264048
0.85[AMR][1000 genomes]
rs73264062
0.85[AMR][1000 genomes]
rSNP related genes
Symbol
Regulation type
IL3
Proximal transcriptional regulation
RNA5SP192
Distal transcriptional regulation
ENSG00000235775
Distal transcriptional regulation
ENSG00000233006
Distal transcriptional regulation
MIR3936
Distal transcriptional regulation
IL3
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)