SNP Report
Basic Infomation
| Name | rs4963282 dbSNP |
|---|---|
| Location | chr:11,61776164 |
| Allele | T/C |
LD-proxy of rSNPs(r2>0.8) (count: 19)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10750961 | 0.92[AFR][1000 genomes] |
| rs10750962 | 0.85[AFR][1000 genomes] |
| rs10792323 | 0.92[AFR][1000 genomes] |
| rs10897200 | 0.89[AFR][1000 genomes] |
| rs10897201 | 0.88[AFR][1000 genomes] |
| rs11230861 | 0.90[AFR][1000 genomes] |
| rs11230862 | 0.93[AFR][1000 genomes] |
| rs12799634 | 0.93[AFR][1000 genomes] |
| rs12800073 | 0.85[AFR][1000 genomes] |
| rs12800784 | 0.87[AFR][1000 genomes] |
| rs1810200 | 0.82[AFR][1000 genomes] |
| rs4963280 | 0.92[AFR][1000 genomes] |
| rs4963447 | 0.87[AFR][1000 genomes] |
| rs61899772 | 0.89[AFR][1000 genomes] |
| rs6591680 | 0.90[AFR][1000 genomes] |
| rs7928748 | 0.89[AFR][1000 genomes] |
| rs7941609 | 0.88[AFR][1000 genomes] |
| rs7942342 | 0.81[AFR][1000 genomes] |
| rs907637 | 0.92[AFR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| FTH1 | Distal transcriptional regulation |
| ENSG00000269089 | Distal transcriptional regulation |
| ENSG00000244176 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014