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rVarBase
SNP Report
Basic Infomation
Name
rs493672  
dbSNP
Location
chr:11,63512075
Allele
A/G
LD-proxy of rSNPs(r
2
>0.8) (count: 9)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs1209064
0.86[AFR][1000 genomes]
rs2957252
0.87[AMR][1000 genomes]
rs2957253
1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs34577629
1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs7123713
0.85[AMR][1000 genomes]
rs7123961
0.85[AMR][1000 genomes]
rs7129721
0.85[AMR][1000 genomes]
rs7130235
0.85[AMR][1000 genomes]
rs7131365
0.85[AMR][1000 genomes]
rSNP related genes
Symbol
Regulation type
RTN3
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)