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rVarBase
SNP Report
Basic Infomation
Name
rs4919345  
dbSNP
Location
chr:10,101304317
Allele
G/C
LD-proxy of rSNPs(r
2
>0.8) (count: 9)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10748785
0.92[CEU][hapmap];0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10883368
0.80[JPT][hapmap]
rs11190139
0.80[JPT][hapmap]
rs12412391
0.80[JPT][hapmap]
rs12413565
0.80[JPT][hapmap]
rs1332101
0.89[ASN][1000 genomes]
rs17094148
0.84[JPT][hapmap]
rs4590800
0.91[ASN][1000 genomes]
rs888208
0.80[JPT][hapmap]
rSNP related genes
Symbol
Regulation type
SLC25A28
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)