SNP Report
Name | rs4911259   dbSNP |
---|---|
Location | chr:20,31376282 |
Allele | T/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1003521 | 0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1007123 | 0.84[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs1007124 | 0.84[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs12329424 | 0.84[EUR][1000 genomes] |
rs1333469 | 0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1474738 | 0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1569686 | 0.88[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs17123658 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1855349 | 0.85[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs1883729 | 0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs1883730 | 0.83[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs2018002 | 0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2235758 | 1.00[CHB][hapmap];0.90[JPT][hapmap];0.91[ASN][1000 genomes] |
rs2235759 | 0.91[ASN][1000 genomes] |
rs2377667 | 0.83[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2377668 | 0.83[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes] |
rs2424899 | 0.84[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs2424903 | 0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2424904 | 0.81[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2424905 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
rs2424909 | 0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2424932 | 0.88[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes] |
rs2889702 | 0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs3787143 | 0.91[ASN][1000 genomes] |
rs4911105 | 0.98[ASN][1000 genomes] |
rs4911106 | 0.85[ASN][1000 genomes] |
rs4911107 | 0.90[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.97[TSI][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4911108 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];0.97[TSI][hapmap];0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4911109 | 0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs4911110 | 0.95[CEU][hapmap];1.00[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.85[TSI][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4911252 | 1.00[CHB][hapmap];0.81[CHD][hapmap];0.82[JPT][hapmap];0.94[ASN][1000 genomes] |
rs4911257 | 0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4911258 | 0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs55674025 | 0.91[ASN][1000 genomes] |
rs57641971 | 0.91[ASN][1000 genomes] |
rs6058859 | 0.88[ASN][1000 genomes] |
rs6058860 | 0.82[EUR][1000 genomes] |
rs6058868 | 0.80[EUR][1000 genomes] |
rs6058869 | 0.81[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.88[TSI][hapmap];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6058886 | 0.91[ASN][1000 genomes] |
rs6058893 | 0.95[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.88[TSI][hapmap];0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6058894 | 0.90[JPT][hapmap];0.91[ASN][1000 genomes] |
rs6058896 | 0.90[CHD][hapmap];0.90[JPT][hapmap];0.87[ASN][1000 genomes] |
rs6087990 | 0.89[CHB][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap];0.95[TSI][hapmap];0.82[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs6087999 | 0.88[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs6119279 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes] |
rs6119946 | 1.00[CHB][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.98[ASN][1000 genomes] |
rs6141814 | 0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs62207021 | 0.91[ASN][1000 genomes] |
rs73112140 | 0.91[ASN][1000 genomes] |
rs742630 | 0.84[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs910084 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
DNMT3B | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014