SNP Report

Basic Infomation

Name	rs4809231 dbSNP
Location	chr:20,62439312
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 92)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11086127	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11697261	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11698072	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11699536	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11699646	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11700372	0.82[AMR][1000 genomes]
rs11905140	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11906437	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs11906513	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11906517	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11908487	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs11908565	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2004748	0.80[AMR][1000 genomes]
rs2004749	0.82[AMR][1000 genomes]
rs2315657	0.82[AMR][1000 genomes]
rs4369919	0.82[AMR][1000 genomes]
rs4538263	0.82[AMR][1000 genomes]
rs4809229	0.80[AMR][1000 genomes]
rs4809233	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4809234	0.80[AMR][1000 genomes]
rs4809236	0.80[AMR][1000 genomes]
rs4809345	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4809348	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4809349	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4809350	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4809351	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4809352	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4809353	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4809354	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4809356	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4809357	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4809358	0.82[AMR][1000 genomes]
rs4809359	0.82[AMR][1000 genomes]
rs4809365	0.80[AMR][1000 genomes]
rs4809366	0.80[AMR][1000 genomes]
rs4991877	0.81[AMR][1000 genomes]
rs57498343	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs57620666	0.82[AMR][1000 genomes]
rs58150746	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6010655	0.84[AMR][1000 genomes]
rs6010656	0.84[AMR][1000 genomes]
rs6010658	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6010659	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6010660	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6010661	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6010664	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6010669	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6010671	0.82[AMR][1000 genomes]
rs6011121	0.82[AMR][1000 genomes]
rs6011124	0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6011125	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6011126	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6011127	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6011128	0.98[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6011129	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6011130	0.98[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6011131	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6011137	0.82[AMR][1000 genomes]
rs6011138	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6011139	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6011140	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6011141	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6011142	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6011143	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6011144	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6011145	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6011146	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6011148	0.82[AMR][1000 genomes]
rs6011152	0.81[AMR][1000 genomes]
rs6011156	0.82[AMR][1000 genomes]
rs6011158	0.81[AMR][1000 genomes]
rs6011160	0.81[AMR][1000 genomes]
rs6011161	0.82[AMR][1000 genomes]
rs6011163	0.80[AMR][1000 genomes]
rs6011164	0.80[AMR][1000 genomes]
rs6011170	0.80[AMR][1000 genomes]
rs66682622	0.82[AMR][1000 genomes]
rs66780440	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs66859979	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs67078803	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs67416152	0.82[AMR][1000 genomes]
rs67549383	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs67563752	0.80[AMR][1000 genomes]
rs67675495	0.80[AMR][1000 genomes]
rs67835080	0.92[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs73624722	0.84[AMR][1000 genomes]
rs73624724	0.92[AMR][1000 genomes]
rs73624726	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs73624728	0.82[ASN][1000 genomes]
rs751860	0.82[AMR][1000 genomes]
rs751861	0.82[AMR][1000 genomes]
rs755017	0.81[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000231208	Proximal transcriptional regulation
ZBTB46	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)