SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 4)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12197742	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12198160	1.00[CHD][hapmap]
rs12209877	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[MEX][hapmap];0.98[TSI][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4710961	0.92[CEU][hapmap];0.86[GIH][hapmap];0.93[TSI][hapmap];0.94[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 3)