SNP Report
Basic Infomation
| Name | rs4671124 dbSNP |
|---|---|
| Location | chr:2,65495283 |
| Allele | A/G |
LD-proxy of rSNPs(r2>0.8) (count: 10)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11424 | 0.86[YRI][hapmap] |
| rs12560 | 0.86[YRI][hapmap] |
| rs2287064 | 0.81[MKK][hapmap];0.86[YRI][hapmap] |
| rs268866 | 1.00[JPT][hapmap] |
| rs3771100 | 1.00[JPT][hapmap] |
| rs4513276 | 0.83[ASW][hapmap];0.92[MKK][hapmap];0.85[YRI][hapmap] |
| rs4671123 | 0.86[YRI][hapmap] |
| rs4671646 | 0.83[ASW][hapmap] |
| rs4671651 | 0.81[YRI][hapmap] |
| rs6715876 | 1.00[JPT][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ACTR2 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 5)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014