SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10878160	0.85[JPT][hapmap]
rs10878161	0.86[JPT][hapmap]
rs10878162	0.85[JPT][hapmap]
rs10878180	0.86[JPT][hapmap]
rs10878247	0.81[AMR][1000 genomes]
rs1491941	0.91[CEU][hapmap];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2307016	0.86[JPT][hapmap]
rs2708435	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6581622	0.82[AMR][1000 genomes]
rs767940	0.85[JPT][hapmap]
rs7969112	0.95[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
ENSG00000225342	Proximal transcriptional regulation
LRRK2	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)