SNP Report
Basic Infomation
| Name | rs4486531 dbSNP |
|---|---|
| Location | chr:10,93827056 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 19)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10882019 | 0.88[AMR][1000 genomes];0.87[ASN][1000 genomes] |
| rs11186825 | 0.88[AMR][1000 genomes];0.85[ASN][1000 genomes] |
| rs11818152 | 0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];0.86[ASN][1000 genomes] |
| rs12256118 | 0.90[AMR][1000 genomes];0.87[ASN][1000 genomes] |
| rs1229580 | 0.90[AMR][1000 genomes] |
| rs1711850 | 0.94[AMR][1000 genomes];0.87[ASN][1000 genomes] |
| rs2797645 | 0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs55901992 | 0.84[AMR][1000 genomes];0.81[ASN][1000 genomes] |
| rs6583801 | 0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs7077333 | 0.90[AMR][1000 genomes];0.87[ASN][1000 genomes] |
| rs7093436 | 0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes] |
| rs7093730 | 0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.82[EUR][1000 genomes];0.88[ASN][1000 genomes] |
| rs73314327 | 0.87[AMR][1000 genomes];0.84[ASN][1000 genomes] |
| rs7916626 | 0.90[AMR][1000 genomes];0.80[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs833364 | 0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs833365 | 0.94[AMR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs833380 | 0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs833386 | 0.89[AMR][1000 genomes];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs9787645 | 0.85[AMR][1000 genomes];0.81[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| CPEB3 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014