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rVarBase
SNP Report
Basic Infomation
Name
rs406141  
dbSNP
Location
chr:1,155172177
Allele
G/T
LD-proxy of rSNPs(r
2
>0.8) (count: 3)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11465207
1.00[YRI][hapmap]
rs2306122
1.00[MEX][hapmap]
rs4472748
1.00[CEU][hapmap]
rSNP related genes
Symbol
Regulation type
THBS3
Proximal transcriptional regulation
GBAP1
Distal transcriptional regulation
ENSG00000231064
RNA binding protein mediated regulation
THBS3
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)