SNP Report

Basic Infomation

Name	rs3821205 dbSNP
Location	chr:2,102852765
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 64)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11673864	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs11677606	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs11678651	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs11678722	0.81[CEU][hapmap];0.95[CHB][hapmap]
rs11686153	0.85[CEU][hapmap];0.91[CHB][hapmap]
rs11687459	0.82[CEU][hapmap];0.91[CHB][hapmap];0.82[ASN][1000 genomes]
rs11692230	0.92[CEU][hapmap];0.90[JPT][hapmap];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11696062	0.82[CEU][hapmap];0.91[CHB][hapmap];0.80[ASN][1000 genomes]
rs1465326	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs1558646	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs17020717	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs1882514	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs1922289	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs1922290	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs1922292	0.91[CHB][hapmap]
rs1922293	0.82[CEU][hapmap];0.91[CHB][hapmap];0.82[ASN][1000 genomes]
rs1922295	0.81[CEU][hapmap];0.86[CHB][hapmap];0.81[ASN][1000 genomes]
rs1922296	0.82[CEU][hapmap];0.90[CHB][hapmap]
rs1922297	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs1960461	0.81[CEU][hapmap];0.91[CHB][hapmap]
rs2041752	0.82[CEU][hapmap];0.91[CHB][hapmap];0.82[ASN][1000 genomes]
rs2041753	0.82[CEU][hapmap];0.91[CHB][hapmap];0.82[ASN][1000 genomes]
rs2080310	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs2141864	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs2141865	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs2160226	0.82[CEU][hapmap];0.91[CHB][hapmap];0.82[ASN][1000 genomes]
rs2178675	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs2287040	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2302623	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs2310236	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs2310237	0.91[CHB][hapmap]
rs2310238	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs2310239	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs2871457	0.81[CEU][hapmap];0.91[CHB][hapmap]
rs2871458	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs34088260	0.82[ASN][1000 genomes]
rs3729564	0.82[CEU][hapmap];0.91[CHB][hapmap];0.82[ASN][1000 genomes]
rs3755282	0.86[CEU][hapmap];0.86[CHB][hapmap];0.90[JPT][hapmap];0.88[ASN][1000 genomes]
rs3755289	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs3755290	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs3771192	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs3771194	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs3771195	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs3771196	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs3771197	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs3771199	0.86[CHB][hapmap]
rs3821207	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs4471910	0.91[CHB][hapmap]
rs4471912	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs4851001	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs4851002	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs4851558	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs6543110	0.91[CHB][hapmap]
rs6715919	0.82[CEU][hapmap];0.91[CHB][hapmap];0.82[ASN][1000 genomes]
rs6733727	0.82[CEU][hapmap];0.91[CHB][hapmap];0.82[ASN][1000 genomes]
rs72820175	0.82[ASN][1000 genomes]
rs7558154	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs7566395	0.82[CEU][hapmap];0.90[CHB][hapmap]
rs7574448	0.91[CHB][hapmap]
rs7605715	0.81[CEU][hapmap];0.89[CHB][hapmap]
rs867770	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs870684	0.82[CEU][hapmap];0.91[CHB][hapmap]
rs995514	0.82[ASN][1000 genomes]
rs995515	0.82[CEU][hapmap];0.91[CHB][hapmap];0.82[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
IL1RL2	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)