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rVarBase
SNP Report
Basic Infomation
Name
rs3745268  
dbSNP
Location
chr:19,10335403
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 4)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs12610701
1.00[MEX][hapmap]
rs12720343
1.00[MEX][hapmap]
rs13306430
1.00[MEX][hapmap]
rs5495
1.00[MEX][hapmap]
rSNP related genes
Symbol
Regulation type
S1PR2
Proximal transcriptional regulation
MIR4322
Distal transcriptional regulation
ENSG00000267534
Distal transcriptional regulation
DNMT1
Distal transcriptional regulation
DNMT1
RNA binding protein mediated regulation
ENSG00000267534
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)