SNP Report
Basic Infomation
| Name | rs34882439 dbSNP |
|---|---|
| Location | chr:14,69027523 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 20)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10483812 | 0.86[AMR][1000 genomes];0.95[ASN][1000 genomes] |
| rs11621276 | 0.95[ASN][1000 genomes] |
| rs11624097 | 0.95[ASN][1000 genomes] |
| rs11624164 | 0.95[ASN][1000 genomes] |
| rs11624333 | 0.95[ASN][1000 genomes] |
| rs11844632 | 0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12889251 | 0.95[ASN][1000 genomes] |
| rs17105780 | 0.90[ASN][1000 genomes] |
| rs17105847 | 0.84[ASN][1000 genomes] |
| rs17755925 | 0.81[AMR][1000 genomes];0.95[ASN][1000 genomes] |
| rs17756000 | 0.86[AMR][1000 genomes];0.95[ASN][1000 genomes] |
| rs17828907 | 0.92[ASN][1000 genomes] |
| rs17828955 | 0.95[ASN][1000 genomes] |
| rs2158357 | 0.95[ASN][1000 genomes] |
| rs34636650 | 0.95[ASN][1000 genomes] |
| rs36028293 | 0.95[ASN][1000 genomes] |
| rs71423314 | 0.90[ASN][1000 genomes] |
| rs71423316 | 0.83[AMR][1000 genomes];0.95[ASN][1000 genomes] |
| rs71423317 | 0.81[AMR][1000 genomes];0.95[ASN][1000 genomes] |
| rs71423318 | 0.95[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| RAD51B | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014